The Camera NDVI ROI statistics file is created by combining the RGB and IR ROI statistics files. An example Camera NDVI ROI statistics file is below (for display purposes the lines have been broken with a '\' character):
#
#
# NDVI statistics timeseries for alligatorriver
#
# Site: alligatorriver
# Veg Type: DB
# ROI ID Number: 1000
# Lat: 35.7879
# Lon: -75.9038
# Elev: 1
# UTC Offset: -5
# Resize Flag: False
# Version: 1
# Creation Date: 2021-12-03
# Creation Time: 10:00:17
# Update Date: 2021-12-03
# Update Time: 10:00:17
#
date,local_std_time,doy,filename_rgb,filename_ir,solar_elev,exposure_rgb,exposure_ir,mask_index,\
r_mean,g_mean,b_mean,ir_mean,ir_std,ir_5_qtl,ir_10_qtl,ir_25_qtl,ir_50_qtl,ir_75_qtl,ir_90_qtl,ir_95_qtl,gcc,\
Y,Z_prime,R_prime,Y_prime,X_prime,NDVI_c
2012-05-06,07:31:09,127,alligatorriver_2012_05_06_073109.jpg,alligatorriver_IR_2012_05_06_073032.jpg,27.9754,355,67,1,\
91,107,54,96,20.5030,61.0000,70.0000,84.0000,99.0000,111.0000,122.0000,128.0000,0.4226,\
96.7480,11.8496,4.8755,5.1348,6.7147,0.1587
2012-05-06,08:01:09,127,alligatorriver_2012_05_06_080109.jpg,alligatorriver_IR_2012_05_06_080031.jpg,34.0538,224,40,1,\
96,107,48,99,21.2579,62.0000,72.0000,87.0000,101.0000,114.0000,126.0000,132.0000,0.4255,\
97.7713,15.7978,6.4400,6.5326,9.2652,0.1799
2012-05-06,08:31:09,127,alligatorriver_2012_05_06_083109.jpg,alligatorriver_IR_2012_05_06_083031.jpg,40.1044,148,18,1,\
92,104,49,96,25.1568,57.0000,67.0000,81.0000,96.0000,112.0000,130.0000,141.0000,0.4246,\
94.6368,22.8614,7.5662,7.7791,15.0823,0.3319
Comments lines at the beginning of the file are preceeded with '# ' and include some basic site metadata along with creation and update dates and times. (The long lines have been broken up here with a '\' character for display only.)
The columns in the file are described below:
date
: local date for imagelocal_std_time
: local standard timedoy
: day of yearfilename_rgb
: RGB filenamefilename_ir
: IR filenamesolar_elev
: solar elevation angleexposure_rgb
: exposure of RGB imageexposure_ir
: exposure of IR imagemask_index
: index into mask listr_mean
: mean red digital number (DN) over the ROIg_mean
: mean green digital number (DN) over the ROIb_mean
: mean blue digital number (DN) over the ROIir_mean
: mean digital number (DN) over the ROI from the IR imageir_std
: standard deviation of digital number (DN) over the ROI from the IR imageir_5_qtl,ir_10_qtl,ir_25_qtl,ir_50_qtl,ir_75_qtl,ir_90_qtl,ir_95_qtl
: the 5,10,...,90,95 quantile values of the DN values over the ROIY,Z_prime,R_prime,Y_prime,X_prime
: intermediate values for camera NDVI calculationNDVI_c
: camera NDVI as calculated in Petach, et al.